1. Last 7 days
    1. With students, a textbook example is pulling all-nighters rather than spacing out their studying over a few days. If they don’t get an A, they often protest.

      focus on what works for individual students instead of rote recommendations

    2. If there wasn’t a time limit, the higher people scored on grit, the more likely they were to keep banging away at a task they were never going to accomplish.

      we need to figure out the right times and ways to allow students independent time to work things out while also providing tools, strategies, and other forms of guidance so that they are actively working towards a goal and not simply spinning their wheels in the name of grit

    3. We’ve taught a generation of kids that their worth is defined primarily by their work ethic.

      this is something I struggle with as an educator and writer. How to encourage dedication and effort, without an overreliance on the idea of "hard work"

    4. Psychologists have long found that rewarding effort cultivates a strong work ethic and reinforces learning.

      this is especially true and needed for writing classes

    5. In surveys, two-thirds of college students say that “trying hard” should be a factor in their grades, and a third think they should get at least a B just for showing up at (most) classes.

      how can we work on bridging the gap between encouraging effort and growth and emphasizing the need for excellence?

    6. “My grade doesn’t reflect the effort I put into this course.”

      it sounds like there is a blacklash to the growth mindset, which is central to this argument

    1. SOVEREIGN PLUMED SERPENT: Here he isseated, holding a snake in his hand. On hisback he wears a quetzal bird, with its headbehind his, its wings at the level of hisshoulders, and its tail hanging down to theground. From the Dresden Codex.

      The snake in his hand, the bird on his back, and its tail down to the ground represent wind, knowledge, and creation? i believe so.

    2. Whatever might be is simply not there: only murmurs, ripples, in thedark, in the night. Only the Maker, Modeler alone, Sovereign PlumedSerpent, the Bearers, Begetters are in the water, a glittering light. Theyare there, they are enclosed in quetzal feathers, in blue-green.

      Could it be that when mankind or life began on Earth, it caused a "ripple" or "imbalance" to affect the natural world?

    3. pooledwater, only the calm sea, only it alone is pooled.

      Upon further research and analysis this statement describes the world before creation where the sky and sea where clam or motionless

    4. hs IS THE ACCOUNT, here it is:Now it still ripples, now it still murmurs, ripples, it still sighs, stillhums, and it is empty under the sky.Here follow the first words, the first eloquence:There is not yet one person, one animal, bird, fish, crab, tree, rock,hollow, canyon, meadow, forest. Only the sky alone is there; the face ofthe earth is not clear. Only the sea alone is pooled under all the sky;there is nothing whatever gathered together. It is at rest; not a singlething stirs. It is held back, kept at rest under the sky.

      The statement might mean that nothing is truly valuable until it's bought together. "There is nothing whatever gathered together. It is at rest; not a single thing stirs. It is held back, kept at rest under the sky." Does rest indicate that the sky protects or makes sure everything stays in balance from straying away?

    5. in the sky, on the earth,the four sides, the four corners, as it is said,by the Maker, Modeler,mother-father of life, of humankind,giver of breath, giver of heart,bearer, upbringer in the light that lastsof those born in the light, begotten in the light;worrier, knower of everything, whatever there is:sky-earth, lake-sea.

      The 'maker' seems to be molding life into the world and bringing life to everything they create. Mother and Father, could the gods be seen as gender-fluid or non-binary?

    6. hefourfoldsiding,fourfold cornering,measuring,fourfold staking,halvingthe cord, stretchingthecord63

      Four sides-four corners-the four corners of the globe is what they might be referring to. North, South, East, and West Hemispheres.

    7. a place to see it, a Council Book,a place to see “The Light That Came fromBeside the Sea,”the account of “Our Place in the Shadows.”a place to see “The Dawn of Life,

      Is the text stating that life began from a shadow and brought life into the world through light? The sea creates the illusion that the sun rises from the water at dawn and sets into the sea at dusk.

    8. They accountedforeverything—anddidit,too—asenlightenedbeings,inenlightenedwords.WeshallwriteaboutthisnowamidthepreachingofGod,inChristendomnow.

      Their Gods created everything and accounted for every small detail of the natural world, as well as beyond, to the Mayans.

    9. the Maker, Modeler,named Bearer, Begetter,Hunahpu Possum, Hunahpu Coyote,Great White Peccary, Coati,Sovereign Plumed Serpent,Heart of the Lake, Heart of the Sea,plate shaper, bowl shaper, as they are called,also named, also described asthe midwife, matchmakernamed Xpiyacoc, Xmucane,defender, protector,twice a midwife, twice a matchmaker,

      Names of divine entities present at the beginning of creation. Some of the Gods have more names than one.

    10. Andhereweshalltake upthedemonstration,revelation,andaccountofhowthingswereputinshadowandbroughttolightby

      Seems as if the Quiché Mayans sought to explain the world and its natural laws.

    1. 5

      Lo que el autor menciona sobre los cambios e innovación para realizar la recolección de datos cuantitativos hacen que las computadoras o software especializados nos permita realizarlo de una manera más eficiente

    2. 4

      Estoy de acuerdo con el pensamiento sobre que el objetivo respecto a la recolección de datos en cualquier investigación consiste en reunir información para abordar las preguntas del estudio que se está realizando.

    1. et ajustées en fonction de l’inflation liées aux projets et incluses dans

      remplacer par: ", rajustées pour tenir compte de l'inflation, pour les projets prévus comprenant"

    2. Les efforts continus de Parcs Canada concernant l'évaluation des obligations liées à la mise hors service d'immobilisations peuvent entraîner des passifs supplémentaires. Tout passif supplémentaire sera comptabilisé pendant l'exercice au cours duquel il sera connu et pourra être raisonnablement estimé.

      remove

    3. et autres obligations liées à la mise hors service d’immobilisations.

      remplacer par: ", des obligations de fermeture et post-fermeture associées aux décharges, des activités de mise hors service liées aux navires, embarcations et autres véhicules et réservoirs de stockage souterrains."

    4. Lorsque les flux de trésorerie futurs requis pour régler un passif sont estimables, prévisibles et devraient se produire dans le futur, une technique de valeur actuelle est utilisée. Le taux d'actualisation utilisé reflète le coût d'emprunt du gouvernement, associé au nombre estimé d'années pour compléter la mise hors service ou l'assainissement du site. Le passif comptabilisé est rajusté chaque année, au besoin, en fonction des rajustements de la valeur actuelle, de l’inflation, des nouvelles obligations, des variations des estimations de la direction et des coûts réels engagés. S’il est impossible de déterminer la probabilité de la responsabilité du gouvernement, un passif éventuel est indiqué dans les notes afférentes aux états financiers.

      Remove

    1. Are you confident you will be able to overcome any possible difficulties in completing college? ________________________________________________________

      Yes I am because I know I have family and friends that will support me.

    2. What do you anticipate will be the most difficult part of completing college? ________________________________________________________

      keeping up with the work and studying.

    3. How many courses will you need to take per term to finish college in your planned time period? ________________________________________________________

      Not sure yet because I'm still in highschool

    1. Ce que je remarque dans cette transcription de minute [mes

      contrairement aux autres paragraphes, celui-ci est très proche de l'espace pour les notes de page. il touche presque la note 9

    1. I will tell the secret to you, to you, only to you. Come closer. This song is a cry for help: Help me! Only you, only you can, you are unique

      "I will tell the secret to you" she is referencing the song that is what the sirens tell them it makes them feel special and that they have to do something. They listen every time which is ultimately what gets them killed

    1. But the true nature of Maya society, the meaning of its hieroglyphics, and the chronicle of its history remained unknown to scholars for centuries after the Spaniards discovered the ancient Maya building sites.

      I wonder why it still remains a mystery

    2. They began to build ceremonial centers, and by 200 ce these had developed into cities containing temples, pyramids, palaces, courts for playing ball, and plazas.

      An early community. I wonder if they also had a HOA; maybe in the for of some form of Tax

    3. They practiced agriculture, built great stone buildings and pyramid temples, worked gold and copper, and used a form of hieroglyphic writing that has now largely been deciphered.

      Pyramid temples similar to egyptians. Did Mayas and egyptians build three-dimentinal for a reason? Maybe they where easier to construct or less labor needed to be involved.

    4. features the Hero Twins, Hunahpu and Xbalanque, who were transformed into, respectively, the Sun and the Moon

      I wonder if other cultures throughout time represent the sun and moon similar to the mayans.From what i can think of Egyption Gods are similar

  2. physerver.hamilton.edu physerver.hamilton.edu
    1. Second, since the charge on the drop wasmultiplied more than four times withoutchanging at all the value of G, or the value ofe l , the observations prove conclusively that inthe case of drops like this, the drag which theair exerts upon the drop is independentof whether the drop is charged or uncharged.

      Clear, logical inference.

    2. How completelythe error arising from evaporation, convectioncurrents, or any sort of disturbances in theair, are eliminated, is shown by the constancyduring all this time in the value of the velocityunder gravity.

      I did not even think that there would be so many potential source of error to consider.

    1. stunninglybeautiful and has much intrinsic value

      wouldn't you say the value is that of human art, art history, and culture, rather than just intrinsic value?

    1. con-front the reality thatconservation may beexpensive and stopdeceiving ourselves and partners in conser-vation with hopes that win-win solutions canalways be found.

      right, but how do you justify spending money (an inherently human thing) on protecting nature rather than protecting people (i.e. social reforms)

    2. make ecosystem services the foundationof our conservation strategies is to imply —intentionally or otherwise — that nature is onlyworth conserving when it is, or can be made,profitable

      i understand this argument, but I disagree; if done properly, nature is worth conserving for humans and for itself

    1. eLife Assessment

      This manuscript reports the development and characterization of iGABASnFR2, a genetically encoded GABA sensor that demonstrates substantially improved performance compared to its predecessor, iGABASnFR1. The work is comprehensive and methodologically rigorous, combining high-throughput mutagenesis, functional screening, structural analysis, biophysical characterization, and in vivo validation. The significance of the findings is fundamental, and the supporting evidence is compelling. iGABASnFR2 represents a notable advance in GABA sensor engineering, enabling enhanced imaging of GABA transmission both in brain slices and in vivo, and constitutes a timely, technically robust addition to the molecular toolkit for neuroscience research.

    2. Reviewer #1 (Public review):

      Summary:

      This manuscript by Kolb and Hasseman et al. introduces a significantly improved GABA sensor, building on the pioneering work of the Janelia team. Given GABA's role as the main inhibitory neurotransmitter and the historical lack of effective optical tools for real-time in vivo GABA dynamics, this development is particularly impactful. The new sensor boasts an enhanced signal-to-noise ratio (SNR) and appropriate kinetics for detecting GABA dynamics in both in vitro and in vivo settings. The study is well-presented, with convincing and high-quality data, making this tool a valuable asset for future research into GABAergic signaling.

      Strengths:

      The core strength of this work lies in its significant advancement of GABA sensing technology. The authors have successfully developed a sensor with higher SNR and suitable kinetics, enabling the detection of GABA dynamics both in vitro and in vivo. This addresses a critical gap in neuroscience research, offering a much-needed optical tool for understanding the most important inhibitory neurotransmitter. The clear representation of the work and the convincing, high-quality data further bolster the manuscript's strengths, indicating the sensor's reliability and potential utility. We anticipate this tool will be invaluable for further investigation of GABAergic signaling.

      Weaknesses:

      Despite the notable progress, a key limitation is that the current generation of GABA sensors, including the one presented here, still exhibits inferior performance compared to state-of-the-art glutamate sensors. While this work is a substantial leap forward, it highlights that further improvements in GABA sensors would still be highly beneficial for the field to match the capabilities seen with glutamate sensors.

    3. Reviewer #2 (Public review):

      Summary:

      This manuscript presents the development and characterization of iGABASnFR2, a genetically encoded GABA sensor with markedly improved performance over its predecessor, iGABASnFR1. The study is comprehensive and methodologically rigorous, integrating high-throughput mutagenesis, functional screening, structural analysis, biophysical characterization, and in vivo validation. iGABASnFR2 represents a significant advancement in GABA sensor engineering and application in imaging GABA transmission in slice and in vivo. This is a timely and technically strong contribution to the molecular toolkit for neuroscience.

      Strengths:

      The authors apply a well-established sensor optimization pipeline and iterative engineering strategy from single-site to combinatorial mutants to engineer iGABASnFR2. The development of both positive and negative going variants (iGABASnFR2 and iGABASnFR2n) offers experimental flexibility. The structure and interpretation of the key mutations provide insights into the working mechanism of the sensor, which also suggest optimization strategies. Although individual improvements in intrinsic properties are incremental, their combined effect yields clear functional gains, enabling detection of direction-selective GABA release in the retina and volume-transmitted GABA signaling in somatosensory cortex, which were challenging or missed using iGABASnFR1.

      Weaknesses:

      With minor revisions and clarifications, especially regarding membrane trafficking, this manuscript will be a valuable resource for probing inhibitory transmission.

    1. Public Reviews:

      Reviewer #1 (Public Review):

      Summary:

      Plasmodium vivax can persist in the liver of infected individuals in the form of dormant hypnozoites, which cause malaria relapses and are resistant to most current antimalarial drugs. This highlights the need to develop new drugs active against hypnozoites that could be used for radical cure. Here, the authors capitalize on an in vitro culture system based on primary human hepatocytes infected with P. vivax sporozoites to screen libraries of repurposed molecules and compounds acting on epigenetic pathways. They identified a number of hits, including hydrazinophthalazine analogs. They propose that some of these compounds may act on epigenetic pathways potentially involved in parasite quiescence. To provide some support to this hypothesis, they document DNA methylation of parasite DNA based on 5-methylcytosine immunostaining, mass spectrometry, and bisulfite sequencing.

      Strengths:

      -The drug screen itself represents a huge amount of work and, given the complexity of the experimental model, is a tour de force.

      -The screening was performed in two different laboratories, with a third laboratory being involved in the confirmation of some of the hits, providing strong support that the results were reproducible.

      -The screening of repurposing libraries is highly relevant to accelerate the development of new radical cure strategies.

      We thank the reviewer for pointing out the strengths of our report.

      Weaknesses:

      The manuscript is composed of two main parts, the drug screening itself and the description of DNA methylation in Plasmodium pre-erythrocytic stages. Unfortunately, these two parts are loosely connected. First, there is no evidence that the identified hits kill hypnozoites via epigenetic mechanisms. The hit compounds almost all act on schizonts in addition to hypnozoites, therefore it is unlikely that they target quiescence-specific pathways. At least one compound, colforsin, seems to selectively act on hypnozoites, but this observation still requires confirmation. Second, while the description of DNA methylation is per se interesting, its role in quiescence is not directly addressed here. Again, this is clearly not a specific feature of hypnozoites as it is also observed in P. vivax and P. cynomolgi hepatic schizonts and in P. falciparum blood stages. Therefore, the link between DNA methylation and hypnozoite formation is unclear. In addition, DNA methylation in sporozoites may not reflect epigenetic regulation occurring in the subsequent liver stages.

      We agree our report lacks direct evidence that hydrazinophthalazines are interacting with parasite epigenetic mechanisms. We spent significant resources attempting several novel approaches to establish a direct connection, but technological advances are needed to enable such studies, which we mention in the introduction and discussion. We disagree that schizonticidal activity automatically excludes the possibility a hypnozonticidal hit is acting on quiescence-specific pathways because both hypnozoites and schizonts are under epigenetic control and these pathways are likely performing different functions in different stages. Also important is the use of the word ‘specific’ as this term could be used to indicate parasite versus host (a drug that clears a parasite infection with a safety margin), parasite-directed effect versus host-directed effect (a drug acting via an agonistic or antagonistic effect on parasite or host pathway(s), but leading to parasite death in either case), hypnozoite versus schizont, or P. vivax versus other Plasmodium species. We were careful to indicate the usage of ‘specific’ throughout the text. Given the almost-nonexistent hit rate when screening diverse small molecule libraries screening against P. vivax hypnozoites, and remarkable increase in hits when screening epigenetic inhibitors as described in this report, our data suggests epigenetic pathways are important to the regulation of hypnozoite dormancy in addition to regulation of other parasite stages, but those effects are outside the scope of this report.

      -The mode of action of the hit compounds remains unknown. In particular, it is not clear whether the drugs act on the parasite or on the host cell. Merely counting host cell nuclei to evaluate the toxicity of the compounds is probably acceptable for the screen but may not be sufficient to rule out an effect on the host cell. A more thorough characterization of the toxicity of the selected hit compounds is required.

      We agree, and mention in the results and discussion, that the effect could be mediated through host pathways. This is not unlike the 8-aminoquinolones, which are activated by host cytochromes and kill via ROS, which is a nonspecific mechanism (that is, the compound is not directly interacting with a parasite target) leading to a parasite-specific effect (the parasite cannot tolerate the ROS produced, but the host can). During screening, it is generally the case that detecting hits with direct effects on the target organism are more desirable, so hits are counterscreened for general cytotoxicity. In this report, we show an effect on the parasite in direct comparison to the effect on host primary hepatocytes in the P. vivax assay itself, and follow up on hits with general counterscreens using two mammalian cell lines using CellTiter Glo, which does not rely on nuclei counts. Some compounds did show general cytotoxic effects, but with selectivity (more potency) against P. vivax liver stages, while other hits like the hydrazinophthalazines did not show an effect against primary hepatocytes and show only weak toxicity against mammalian cells at the highest dose tested. Further studies are needed to determine if the effect is indeed host- or parasite-directed and, if hydrazinophthalazines are to be developed into marketed antimalarials, extensive safety testing would be part of the development process.

      -There is no convincing explanation for the differences observed between P. vivax and P. cynomolgi. The authors question the relevance of the simian model but the discrepancy could also be due to the P. vivax in vitro platform they used.

      Fully characterizing the chemo-sensitivity of P. vivax and P. cynomolgi liver stages is outside the scope of this report. Rather, we report tool compounds which could be used in future studies to further characterize these sister species. We also make the point that P. cynomolgi is the gold standard for in vivo antirelapse activity, but it is still a model species, not a target species, and so few experimental hypnozonticidal compounds have been reported that the predictive value of P. cynomolgi is not fully understood. We found that several of our hits were species-specific using our in vitro platforms, thus future studies are needed to ensure this predictive value.

      -Many experiments were performed only once, not only during the screen (where most compounds were apparently tested in a single well) but also in other experiments. The quality of the data would be increased with more replication.

      Due to their size, compound library screens are typically performed once, with confirmation in dose-response assays, which were repeated several times. Rhesus PK studies was performed once on three animals, which is typical. All other studies were performed at least twice and most were performed three times or more. We provide a data table showing readers the source material for all replication as well as other source data tables showing the raw data for dose-response and other assays.

      -While the extended assay (12 days versus 8 days) represents an improvement of the screen, the relevance of adding inhibitors of core cytochrome activity is less clear, as under these conditions the culture system deviates from physiological conditions.

      We agree that cytochrome inhibitors render the platform less physiologically relevant, but the goal of screening is to detect hits which could be improved upon using medicinal chemistry, including metabolic stability. Metabolic stability is better assessed using standard assays such as liver microsomes, thus our goal was to characterize the effects of test compounds on the parasite without the confounding effect of hepatic metabolism.

      Reviewer #2 (Public Review):

      Summary:

      In this manuscript, inhibitors of the P. vivax liver stages are identified from the Repurposing, Focused Rescue, and Accelerated Medchem (ReFRAME) library as well as a 773-member collection of epigenetic inhibitors. This study led to the discovery that epigenetics pathway inhibitors are selectively active against P. vivax and P. cynomolgi hypnozoites. Several inhibitors of histone post-translational modifications were found among the hits and genomic DNA methylation mapping revealed the modification on most genes. Experiments were completed to show that the level of methylation upstream of the gene (promoter or first exon) may impact gene expression. With the limited number of small molecules that act against hypnozoites, this work is critically important for future drug leads. Additionally, the authors gleaned biological insights from their molecules to advance the current understanding of essential molecular processes during this elusive parasite stage.

      Strengths:

      -This is a tremendously impactful study that assesses molecules for the ability to inhibit Plasmodium hypnozoites. The comparison of various species is especially relevant for probing biological processes and advancing drug leads.

      -The SI is wonderfully organized and includes relevant data/details. These results will inspire numerous studies beyond the current work.

      We thank the reviewer for pointing out the strengths of our report.

      Reviewer #3 (Public Review):

      Although this work represents a massive screening effort to find new drugs targeting P. vivax hypnozoites, the authors should balance their statement that they identified targetable epigenetic pathways in hypnozoites.

      -They should emphasize the potential role of the host cell in the presentation of the results and the discussion, as it is known that other pathogens modify the epigenome of the host cell (i.e. toxoplasma, HIV) to prevent cell division. Also, hydrazinophtalazines target multiple pathways (notably modulation of calcium flux) and have been shown to inhibit DNA-methyl transferase 1 which is lacking in Plasmodium.

      -In a drug repurposing approach, the parasite target might also be different than the human target.

      -The authors state that host-cell apoptotic pathways are downregulated in P. vivax infected cells (p. 5 line 162). Maybe the HDAC inhibitors and DNA-methyltransferase inhibitors are reactivating these pathways, leading to parasite death, rather than targeting parasites directly.

      We agree caution must be taken as we did not directly confirm the mechanism of our hits. Many follow up studies will be needed to do so. We do point out in the discussion that the mechanism of hits could be host-directed. We agree with the notion that some of these hits could be affecting parasitized host cell pathways, which lead to death of the parasitized cell, with the parasite being collateral damage, yet such a mechanism could lead to a safe and effective novel antimalarial.

      It would make the interpretation of the results easier if the authors used EC50 in µM rather than pEC50 in tables and main text. It is easy to calculate when it is a single-digit number but more complicated with multiple digits.

      We apologize for the atypical presentation of potency data. However, there is growing concern in drug discovery when Standard Deviation is applied to Potency data because Standard Deviation is a linear calculation and Potency is a log effect, making the math incompatible. We understand thousands of papers are reported every year using this mathematically incorrect method, making our presentation of these data less familiar. However, we define pEC50 in its use in the text and table legends and hope to increase its use in the broader scientific community.

      Authors mention hypnozoite-specific effects but in most cases, compounds are as potent on hypnozoite and schizonts. They should rather use "liver stage specific" to refer to increased activity against hypnozoites and schizonts compared to the host cell. The same comment applies to line 351 when referring to MMV019721. Following the same idea, it is a bit far-fetched to call MMV019721 "specific" when the highest concentration tested for cytotoxicity is less than twice the EC50 obtained against hypnozoites and schizonts.

      We have reviewed and revised statements in the manuscript to ensure the effect we are describing is accurate in terms of parasite versus parasite form.

      Page 5 lines 187-189, the authors state "...hydrazinophtalazines were inactive when tested against P. berghei liver schizonts and P. falciparum asexual blood stages, suggesting that hypnozoite quiescence may be biologically distinct from developing schizonts". The data provided in Figure 1B show that these hydrazinophtalazines are as potent in P. vivax schizonts than in P. vivax hypnozoites, so the distinct activity seems to be Plasmodium species specific and/or host-cell specific (primary human hepatocytes rather than cell lines for P. berghei) rather than hypnozoite vs schizont specific.

      We agree the effect of hydrazinophtalazine could be more species specific than stage specific, but the context of our comment has to do with current methods in antimalarial discovery and development. Given the biological uniqueness of the various Plasmodium species and stages, any hypnozonticidal hit may or may not have pan-species or pan-stage activity; our goal was to characterize this. Regardless of the mechanism, we found it interesting that the hydrazinophtalazines kill P. vivax hypnozoites, but not P. cynomolgi hypnozoites nor other species and stages used in antimalarial drug development. This result makes the point that hypnozoite-focused assays may be required to detect and develop hypnozonticidal hits, regardless of what other species or stages they may or may not act on.

      Why choose to focus on cadralazine if abandoned due to side effects? Also, why test the pharmacokinetics in monkeys? As it was a marketed drug, were no data available in humans?

      Cadralazine was found more potent than hydralazine and PK data was available from humans, thus dose prediction calculations showed an efficacious dose was more achievable with cadralazine than hydralazine. Side effects are often dependent on dose and regimen, which are very likely to be much different for treating malaria versus hypertension. Thus, the potential side effects of cadralazine if it was to be used as an antimalarial are simply unknown and are not disqualifying at this step. The PK study was done in Rhesus macaques so we could calculate the dose needed to achieve coverage of EC90 during a planned follow up in a Rhesus-P. cynomolgi relapse model. However, this planned in vivo efficacy study was not justified once we concurrently discovered cadralazine was inactive on P. cynomolgi in vitro.

      In the counterscreen mentioned on page 6, the authors should mention that the activity of poziotinib in P. berghei and P. cynomolgi is equivalent to cell toxicity, so likely not due to parasite specificity.

      Poziotinib shows activity against mammalian cell lines but not against the primary hepatocyte cultures supporting dose-response assays against P. vivax liver forms, which do not replicate. Thus, poziotinib appears selective in the liver stage assay but also may have a much more potent effect in continuously replicating cell lines.

      To improve the clarity and flow of the manuscript, could the authors make a recapitulative table/figure for all the data obtained for poziotinib and hydrazinophtalazines in the different assays (8-days vs 12-days) and laboratory settings rather than separate tables in main and supplementary figures. Maybe also reorder the results section notably moving the 12-day assay before the DNA methylation part.

      We apologize for the large amount of data presented but believe we are presenting it in the clearest way possible. All raw data is available if readers wish to re-analyze or re-organize our findings.

      The isobologram plot shows an additive effect rather than a synergistic effect between cadralazine and 5-azacytidine, please modify the paragraph title accordingly. Please put the same axis scale for both fractional EC50 in the isobologram graph (Figure 2A).

      The isobologram shows the effect approaching synergy at some combinations. The isobologram was rendered using standard methods. The raw data is available if readers wish to re-analyze it.

      Concerning the immunofluorescence detection of 5mC and 5hmC, the authors should be careful with their conclusions. The Hoechst signal of the parasites is indistinguishable because of the high signal given by the hepatocyte nuclei. The signal obtained with the anti-5hmC in hepatocyte nuclei is higher than with the anti-5mC, thus if a low signal is obtained in hypnozoites and schizonts, it might be difficult to dissociate from the background. In blood stages (Figure S18), the best to obtain a good signal is to lyse the red blood cell using saponin, before fixation and HCl treatment.

      We spent many hours using high resolution imaging of hundreds of parasites trying to detect clear 5hmC signal in both hypnozoites and schizonts but never saw a clearly positive signal. Indeed, the host signal can be confounding, thus we felt the most clear and unbiased way to quantify and present these data was using HCI. We appreciate the suggestion to lyse cells first for detecting in the blood stage.

      To conclude that 5mC marks are the predominate DNA methylation mark in both P. falciparum and P. vivax, authors should also mention that they compare different stages of the life cycle, that might have different methylation levels.

      We do mention at the start of this section our reasoning that quantifying marks in sporozoites was technically achievable, but not in a mixed culture of parasites and hepatocytes. We agree they could have different marks at these different stages.

      Also, the authors conclude that "[...] 5mC is present at low level in P. vivax and P. cynomolgi sporozoites and could control liver stage development and hypnozoite quiescence". Based on the data shown here, nothing, except presence the of 5mC marks, supports that DNA methylation could be implicated in liver stage development or hypnozoite quiescence.

      We clearly show sporozoite and liver stage DNA is methylated, which implicates this fundamental cell function exists in P. vivax liver stages, and that compounds with characterized activity against DNMT are active on liver stages. We acknowledge we were unable to show a direct effect and use the qualifier ‘could’ for this very reason.

      How many DNA-methyltransferase inhibitors were present in the epigenetic library? Out of those, none were identified as hits, maybe the hydrazinophtalazines effect is not linked to DNMT inhibition but another target pathway of these molecules like calcium transport?

      We supply the complete list of inhibitors in the epigenetic library as a supplemental file, the library contained 773 compounds. Hydrazinophtalazines were not included in the library, but several other DNA methyltransferase inhibitors were inactive. It is possible that hydrazinophtalazine activity is linked to other mechanisms but the inactivity of other DNMT inhibitors does not preclude the possibility hydrazinophtalazines are acting through DNMT.

      The authors state (line 344): "These results corroborate our hypothesis that epigenetic pathways regulate hypnozoites". This conclusion should be changed to "[...] that epigenetic pathways are involved in P. vivax liver stage survival" because:

      -The epigenetic inhibitors described here are as active on hypnozoite than liver schizonts.

      -Again, we cannot rule out that the host cell plays a role in this effect and that the compound may not act directly on the parasite.

      The same comment applies to the quote in lines 394 to 396. There is no proof in the results presented here that DNA methylation plays any role in the effect of hydrazinophtalazines in the anti-plasmodial activity obtained in the assay.

      We maintain that we use words throughout the text that express uncertainty about the mechanisms involved. It is important to point out that, prior to this paper, the number of hypnozonticidal hits was incredibly low and this field is just emerging. The fundamental role of epigenetic mechanisms is regulation of gene expression. Finding several hypnozonticial hits when screening epigenetic libraries implies epigenetic pathways are important for hypnozoite survival. We intentionally do not specify exact mechanisms or if they are host or parasite pathways. Host-parasite interactions in the liver stage are incredibly difficult to resolve and are outside the scope of this report. Furthermore, this statement is not exclusive to schizonts, but since screens of diversity sets against schizonts result in a much higher hit rate, the focus of this comment is unearthing rare hypnozonticidal hits.