17 Matching Annotations
  1. Jul 2023
      • Title
        • The landscape of biomedical research
      • Authors
        • Rita González-Márquez,
        • Luca Schmidt,
        • Benjamin M. Schmidt,
        • Philipp Berens
        • Dmitry Kobak
      • Date
        • April 11, 2023
      • Source
      • Abstract
        • The number of publications in biomedicine and life sciences
        • has rapidly grown over the last decades,
        • with over 1.5 million papers now published every year.
        • This makes it difficult to
          • keep track of new scientific works and
          • to have an overview of the evolution of the field as a whole.
        • Here we
          • present a 2D atlas of the entire corpus of biomedical literature, and
          • argue that it provides
            • a unique and
            • useful overview
          • of the life sciences research.
        • We base our atlas on the abstract texts of
        • 21 million English articles from the PubMed database.
        • To embed the abstracts into 2D, we use
          • a large language model PubMedBERT, combined with
          • t-SNE tailored to handle samples of our size.
        • We use our atlas to study
          • the emergence of the Covid-19 literature,
          • the evolution of the neuroscience discipline,
          • the uptake of machine learning, and
          • the distribution of gender imbalance in academic authorship.
        • Furthermore, we present an interactive web version of our atlas that
          • allows easy exploration and
          • will enable further insights and facilitate future research.
  2. May 2022
    1. GeneName: DICER1 syndrome (pleuropulmonary blastoma familial tumor susceptibility syndrome), PMID (PubMed ID): 29762508, HGNCID: 17098, Inheritance pattern: autosomal-dominant disease, Disease entity: Plueropulomary Blastoma, Mutation: Somatic, Zygosity: heterozygous, Variant: multiple variants, Family information: NA, Case: young children, CasePresentingHPO: N/A, CasePreviousTesting: N/A, Gnomade #: N/A , Mutation type: deletion

  3. Apr 2022
  4. Jan 2022
  5. Oct 2021
    1. A cup of coffee reduced iron absorption from a hamburger meal by 39% as compared to a 64% decrease with tea, which is known to be a potent inhibitor of iron absorption.

      Кофе как риск фактор анемии

  6. Aug 2020
  7. Jun 2020
  8. Dec 2019
    1. The whole country was in mental chaos and I never had been in such a destructive mental state at the time. It was hard to believe that someone would do this following a faith that is supposedly promotes peace

      Following the 9/11 and 7/7 attacks Islamophobia intensified, which can be understood, at the psychological level, as an internal racist defence against overwhelming anxiety."

      https://www.ncbi.nlm.nih.gov/pubmed/19795546

    1. The whole country was in mental chaos and I never had been in such a destructive mental state at the time. It was hard to believe that someone would do this following a faith that is supposedly promotes peace

      "Following the 9/11 and 7/7 attacks Islamophobia intensified, which can be understood, at the psychological level, as an internal racist defence against overwhelming anxiety."

  9. Oct 2018
  10. Apr 2018
    1. This page

      This page is the main page through which the other pages are accessed, and to which they redirect when finished. Some pages have directions to the PubMed Commons pages that in 2013 began facilitating the annotation of articles in the bioscience literature. Sadly, this was stopped in 2018, but comments can be retrieved through the Hypothesis site as detailed on my Laboratory Page.

  11. Jan 2018
    1. Combination therapy strategies for improving PD-1 blockade efficacy

      Methods of augmenting PD-1 blockade against cancer involve concomitant CTLA-4 inhibition among others. Here is a visual representation of common biological pathways and cell types between these genes.

      “Immune

      https://www.biovista.com/vizit-research/#!bv_gid=1357fa5ee3b610d1918476e21c7be00c

    1. An interactive network of bibliographic connections between some central proteins of the circadian clock, along with links to some major model organisms.

      Circadian clock proteins