317 Matching Annotations
  1. Jul 2021
  2. www.biorxiv.org www.biorxiv.org
    Integrative profiling of early host chromatin accessibility responses in human neutrophils with sensitive pathogen detection.
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    1. EMBOpress 16 Jul 2021

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    biorxiv.org/content/10.1101/2020.04.28.066829v1
  3. www.biorxiv.org www.biorxiv.org
    A phosphoproteomic approach reveals that PKD3 controls phenylalanine and tyrosine metabolism
    1
    1. EMBOpress 16 Jul 2021

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    biorxiv.org/content/10.1101/2020.07.20.211474v1
  4. www.biorxiv.org www.biorxiv.org
    Stepwise transmigration cascade of T and B cells through the perivascular channel in lymph node high endothelial venules
    1
    1. EMBOpress 16 Jul 2021

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    biorxiv.org/content/10.1101/2020.12.20.423079v1
  5. www.biorxiv.org www.biorxiv.org
    Proteomics characterisation of the L929 cell supernatant and its role in BMDM differentiation
    1
    1. EMBOpress 14 Jul 2021

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    biorxiv.org/content/10.1101/2020.08.20.259515v2
  6. www.biorxiv.org www.biorxiv.org
    Fast but not furious: a streamlined selection method for genome edited cells
    1
    1. EMBOpress 14 Jul 2021

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    biorxiv.org/content/10.1101/2021.01.22.427783v1
  7. www.biorxiv.org www.biorxiv.org
    Dynamic closed states of a ligand-gated ion channel captured by cryo-EM and simulations
    1
    1. EMBOpress 14 Jul 2021

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    biorxiv.org/content/10.1101/2021.01.04.425171v1
  8. www.biorxiv.org www.biorxiv.org
    Microglia show differential transcriptomic response to Aβ peptide aggregates ex vivo and in vivo
    1
    1. EMBOpress 14 Jul 2021

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    biorxiv.org/content/10.1101/2021.03.02.433544v1
  9. www.biorxiv.org www.biorxiv.org
    IL-13 deficiency exacerbates lung damage and impairs epithelial-derived type 2 molecules during nematode infection
    1
    1. EMBOpress 13 Jul 2021

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    biorxiv.org/content/10.1101/2020.10.14.337949v1
  10. www.biorxiv.org www.biorxiv.org
    Human IFITM3 restricts Chikungunya virus and Mayaro virus infection and is susceptible to virus-mediated counteraction
    1
    1. EMBOpress 02 Jul 2021

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    biorxiv.org/content/10.1101/2020.09.11.292946v1
  11. www.biorxiv.org www.biorxiv.org
    Vaccinia virus hijacks ESCRT-mediated multivesicular body formation for virus egress
    1
    1. EMBOpress 01 Jul 2021

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    biorxiv.org/content/10.1101/2020.07.15.203935v1
  12. May 2021
  13. www.biorxiv.org www.biorxiv.org
    Gametic specialization of centromeric histone paralogs in Drosophila virilis
    1
    1. EMBOpress 19 May 2021

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    biorxiv.org/content/10.1101/530295v1
  14. www.biorxiv.org www.biorxiv.org
    On the Relation of Gene Essentiality to Intron Structure: A Computational and Deep Learning Approach
    1
    1. EMBOpress 19 May 2021

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    biorxiv.org/content/10.1101/2020.03.31.019125v2
  15. www.biorxiv.org www.biorxiv.org
    Mapping the micro-proteome of the nuclear lamina and lamin associated domains
    1
    1. EMBOpress 04 May 2021

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    biorxiv.org/content/10.1101/828210v1
  16. Apr 2021
  17. www.biorxiv.org www.biorxiv.org
    CDCP1 controls compensatory renal growth by integrating Src and Met signaling
    1
    1. EMBOpress 28 Apr 2021

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    biorxiv.org/content/10.1101/789339v2
  18. www.biorxiv.org www.biorxiv.org
    Mitochondrial Aurora kinase A induces mitophagy by interacting with MAP1LC3 and Prohibitin 2
    1
    1. EMBOpress 24 Apr 2021

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    biorxiv.org/content/10.1101/2020.04.06.027896v2
  19. www.biorxiv.org www.biorxiv.org
    https://doi.org/10.1101/2020.06.12.149229
    1
    1. EMBOpress 24 Apr 2021

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    biorxiv.org/content/10.1101/2020.06.12.149229v3
  20. www.biorxiv.org www.biorxiv.org
    Replicated chromatin curtails 53BP1 recruitment in BRCA1-proficient and -deficient cells
    1
    1. EMBOpress 24 Apr 2021

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    biorxiv.org/content/10.1101/2020.02.24.947168v1
  21. www.biorxiv.org www.biorxiv.org
    CellMixS: quantifying and visualizing batch effects in single cell RNA-seq data
    1
    1. EMBOpress 06 Apr 2021

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    biorxiv.org/content/10.1101/2020.12.11.420885v1
  22. www.biorxiv.org www.biorxiv.org
    RNA polymerase backtracking drives the accumulation of fission yeast condensin at active genes
    1
    1. EMBOpress 02 Apr 2021

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    biorxiv.org/content/10.1101/2020.11.13.381434v2
  23. www.biorxiv.org www.biorxiv.org
    PieParty: Visualizing cells from scRNA-seq data as pie charts
    1
    1. EMBOpress 02 Apr 2021

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    biorxiv.org/content/10.1101/2020.08.25.267021v2
  24. www.biorxiv.org www.biorxiv.org
    Different mutant RUNX1 oncoproteins program alternate haematopoietic differentiation trajectories
    1
    1. EMBOpress 02 Apr 2021

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    biorxiv.org/content/10.1101/2020.08.10.244657v1
  25. www.biorxiv.org www.biorxiv.org
    LRRK2-phosphorylated Rab10 sequesters Myosin Va with RILPL2 during ciliogenesis blockade
    1
    1. EMBOpress 02 Apr 2021

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    biorxiv.org/content/10.1101/2020.04.28.065664v1
  26. www.biorxiv.org www.biorxiv.org
    http://biorxiv.org/cgi/content/short/2020.09.03.281774
    1
    1. EMBOpress 02 Apr 2021

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    biorxiv.org/content/10.1101/2020.09.03.281774v2
  27. Mar 2021
  28. psyarxiv.com psyarxiv.com
    Family Still Matters: Human Social Motivation during a Global Pandemic
    1
    1. n.parfitt 12 Mar 2021

      Pick, C. M., Ko, A., Wormley, A., Kenrick, D., & Varnum, M. E. W., PhD. (2021, March 9). Family Still Matters: Human Social Motivation during a Global Pandemic. https://doi.org/10.31234/osf.io/z7mjc

      is:preprint lang:en COVID-19 family social motivation global fundamental social motives life satisfaction behavioral science social psychology personality psychology multi-country mate-acquisition wellbeing relationship avoidance disease
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    psyarxiv.com/z7mjc/
  29. Feb 2021
  30. www.biorxiv.org www.biorxiv.org
    Insulin signaling mediates neurodegeneration in glioma
    1
    1. EMBOpress 25 Feb 2021

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    biorxiv.org/content/10.1101/2020.01.03.894469v2
  31. www.biorxiv.org www.biorxiv.org
    A FIJI Macro for quantifying pattern in extracellular matrix
    1
    1. EMBOpress 25 Feb 2021

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    biorxiv.org/content/10.1101/867507v4
  32. www.biorxiv.org www.biorxiv.org
    Reduced RNA turnover as a driver of cellular senescence
    1
    1. EMBOpress 25 Feb 2021

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    biorxiv.org/content/10.1101/800128v3
  33. www.biorxiv.org www.biorxiv.org
    Cyclin A2 localises in the cytoplasm at the S/G2 transition to activate Plk1
    1
    1. EMBOpress 25 Feb 2021

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    biorxiv.org/content/10.1101/191437v2
  34. www.biorxiv.org www.biorxiv.org
    Htr6 and Sstr3 ciliary targeting relies on both IC3 loops and C-terminal tails
    1
    1. EMBOpress 25 Feb 2021

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    biorxiv.org/content/10.1101/2020.03.19.997262v1
  35. www.biorxiv.org www.biorxiv.org
    IMiDs induce FAM83F degradation via an interaction with CK1α to attenuate Wnt signalling
    1
    1. EMBOpress 25 Feb 2021

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    biorxiv.org/content/10.1101/2020.05.25.114660v1
  36. www.biorxiv.org www.biorxiv.org
    Helicobacter pylori accelerates KRAS-dependent gastric dysplasia
    1
    1. EMBOpress 25 Feb 2021

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    biorxiv.org/content/10.1101/2020.10.06.328518v1
  37. www.biorxiv.org www.biorxiv.org
    SCFCdc4 ubiquitin ligase regulates synaptonemal complex formation during meiosis
    1
    1. EMBOpress 25 Feb 2021

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    biorxiv.org/content/10.1101/2020.07.30.228064v1
  38. www.biorxiv.org www.biorxiv.org
    Fungal mycelia and bacterial thiamine establish a mutualistic growth mechanism
    1
    1. EMBOpress 25 Feb 2021

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    biorxiv.org/content/10.1101/2020.07.12.199612v1
  39. www.biorxiv.org www.biorxiv.org
    Implications for tetraspanin-enriched microdomain assembly based on structures of CD9 with EWI-F
    1
    1. EMBOpress 25 Feb 2021

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    biorxiv.org/content/10.1101/2020.06.02.130047v1
  40. www.biorxiv.org www.biorxiv.org
    Overlapping oriC and centromere-like functions in secondary genome replicons determine their maintenance independent of chromosome I in Deinococcus radiodurans
    1
    1. EMBOpress 25 Feb 2021

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    biorxiv.org/content/10.1101/2020.03.28.013953v1
  41. www.biorxiv.org www.biorxiv.org
    Short duration splice promoting compound enables a tunable mouse model of spinal muscular atrophy
    1
    1. EMBOpress 25 Feb 2021

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    biorxiv.org/content/10.1101/2020.08.17.253526v1
  42. www.biorxiv.org www.biorxiv.org
    The bacterial quorum sensing signal DSF hijacks Arabidopsis thaliana sterol biosynthesis to suppress plant innate immunity
    1
    1. EMBOpress 25 Feb 2021

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    biorxiv.org/content/10.1101/2020.01.30.927731v1
  43. www.biorxiv.org www.biorxiv.org
    Mps2 links Csm4 and Mps3 to form a telomere-associated LINC complex in budding yeast
    1
    1. EMBOpress 25 Feb 2021

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    biorxiv.org/content/10.1101/2020.05.30.125559v1
  44. www.biorxiv.org www.biorxiv.org
    A double role of the Gal80 N-terminus in activation of transcription by Gal4p
    1
    1. EMBOpress 25 Feb 2021

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    biorxiv.org/content/10.1101/2020.02.03.931568v1
  45. psyarxiv.com psyarxiv.com
    The role of human fallibility in psychological research: A survey of mistakes in data management
    1
    1. sophia.sterckx 22 Feb 2021

      Aczel, Balazs, Marton Kovacs, and Rink Hoekstra. ‘The Role of Human Fallibility in Psychological Research: A Survey of Mistakes in Data Management’. PsyArXiv, 5 November 2020. https://doi.org/10.31234/osf.io/xcykz.

      is:preprint lang:en Meta-science Social and Behavioral Sciences Psychology human error data management mistakes life-cycle of the data research workflow
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    psyarxiv.com/xcykz/
  46. www.quora.com www.quora.com
    Why is cache invalidation considered difficult? - Quora
    1
    1. TylerRick 08 Feb 2021
      the 2 hardest problems in computer science are essentially the 2 hardest problems of life in general, as far as humans and information are concerned.
      hard things in computer science generalized explanation good analogy difficult/hard problem life in general
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    quora.com/Why-is-cache-invalidation-considered-difficult
  47. Oct 2020
  48. www.biorxiv.org www.biorxiv.org
    Predicting gene regulatory networks from cell atlases
    1
    1. EMBOpress 06 Oct 2020

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    biorxiv.org/content/10.1101/2020.08.21.261735v1
  49. www.biorxiv.org www.biorxiv.org
    DDX5 targets tissue-specific RNAs to promote intestine tumorigenesis
    1
    1. EMBOpress 06 Oct 2020

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    biorxiv.org/content/10.1101/2020.03.25.006668v1
  50. www.biorxiv.org www.biorxiv.org
    A meiosis-specific AAA+ assembly reveals repurposing of ORC during budding yeast gametogenesis
    1
    1. EMBOpress 06 Oct 2020

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    biorxiv.org/content/10.1101/598128v1
  51. www.biorxiv.org www.biorxiv.org
    multicrispr: fast gRNA designer enables prime editing and parallel targeting of thousands of targets
    1
    1. EMBOpress 06 Oct 2020

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    biorxiv.org/content/10.1101/2020.04.15.042861v1
  52. www.biorxiv.org www.biorxiv.org
    Profiles of circulating histidine-rich glycoprotein associate with age and risk of all-cause mortality
    1
    1. EMBOpress 06 Oct 2020

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    biorxiv.org/content/10.1101/464909v3
  53. www.biorxiv.org www.biorxiv.org
    Peptide-based quorum sensing systems in Paenibacillus polymyxa
    1
    1. EMBOpress 06 Oct 2020

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    biorxiv.org/content/10.1101/767517v1
  54. www.biorxiv.org www.biorxiv.org
    A time resolved interaction analysis of Bem1 reconstructs the flow of Cdc42 during polar growth
    1
    1. EMBOpress 06 Oct 2020

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    biorxiv.org/content/10.1101/723171v1
  55. www.biorxiv.org www.biorxiv.org
    An evolutionary approach to systematic discovery of novel deubiquitinases, applied to Legionella
    1
    1. EMBOpress 06 Oct 2020

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    biorxiv.org/content/10.1101/2020.07.01.182683v1
  56. www.biorxiv.org www.biorxiv.org
    Attenuation of cGAS/STING Activity During Mitosis
    1
    1. EMBOpress 06 Oct 2020

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    biorxiv.org/content/10.1101/2019.12.19.883090v2
  57. Sep 2020
  58. www.scientificamerican.com www.scientificamerican.com
    The COVID-19 Pandemic Is Changing Our Dreams
    1
    1. ErikStuchly 29 Sep 2020

      The COVID-19 Pandemic Is Changing Our Dreams—Scientific American. (n.d.). Retrieved September 29, 2020, from https://www.scientificamerican.com/article/the-covid-19-pandemic-is-changing-our-dreams/

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  59. Jul 2020
  60. www.biorxiv.org www.biorxiv.org
    An unexpected contribution of lincRNA splicing to enhancer function.
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    Small molecule inhibitors and a kinase-dead expressing mouse model demonstrate that the kinase activity of Chk1 is essential for mouse embryos and cancer cells
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    Lipid-associated PML domains regulate CCTα, Lipin1 and lipid homeostasis
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    Mitochondrial fusion defects caused by CMT2A disease-associated variants of Mfn2
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    Pleiotropic requirements for human TDP-43 in the regulation of cell and organelle homeostasis
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    A key region of molecular specificity orchestrates unique ephrin-B1 utilization by Cedar virus
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    Evaluation of colorectal cancer subtypes and cell lines using deep learning
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    Pseudomonas aeruginosa lectin LecB impairs keratinocyte fitness by abrogating growth factor signalling
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  68. osf.io osf.io
    Longitudinal changes in the outdoor recreation community’s reaction to the COVID-19 pandemic: Final report on a three-phase national survey of outdoor enthusiasts
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      Rice, W. L., Mateer, T., Taff, B. D., Lawhon, B., Reigner, N., & Newman, P. (2020). Longitudinal changes in the outdoor recreation community’s reaction to the COVID-19 pandemic: Final report on a three-phase national survey of outdoor enthusiasts [Preprint]. SocArXiv. https://doi.org/10.31235/osf.io/gnjcy

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  69. psyarxiv.com psyarxiv.com
    Interdependence and cooperation in daily life
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      Columbus, S., Molho, C., Righetti, F., & Balliet, D. (2020). Interdependence and cooperation in daily life [Preprint]. PsyArXiv. https://doi.org/10.31234/osf.io/e8bhx

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  70. Jun 2020
  71. www.biorxiv.org www.biorxiv.org
    Plant-microbe co-evolution: allicin resistance in a Pseudomonas fluorescens strain (PfAR-1) isolated from garlic
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    Ubiquitin and SUMO conjugation as biomarkers of Acute Myeloid Leukemias response to chemotherapies
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    Dynamic changes in the regulatory T cell heterogeneity and function by murine IL-2 mutein
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    BACH family members regulate angiogenesis and lymphangiogenesis by modulating VEGFC expression
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    The structure of SALSA/DMBT1 SRCR domains reveal the conserved ligand-binding mechanism of the ancient SRCR-fold
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  76. Apr 2020
  77. zoom.us zoom.us
    ¡Bienvenido! Se lo invita a unirse a una reunión: Applying Behavioral Economics to Work and Life. Luego de la inscripción, recibirá un e-mail de confirmación para unirse a la reunión.
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      ¡Bienvenido! Se lo invita a unirse a una reunión: Applying Behavioral Economics to Work and Life. Luego de la inscripción, recibirá un e-mail de confirmación para unirse a la reunión. (n.d.). Zoom Video. Retrieved April 23, 2020, from https://zoom.us/meeting/register/tJUodu6opj4sG9wTXoXvEN_-OVis_vJ6SZi1

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    Measuring the predictability of life outcomes with a scientific mass collaboration
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      Salganik, M. J., Lundberg, I., Kindel, A. T., Ahearn, C. E., Al-Ghoneim, K., Almaatouq, A., Altschul, D. M., Brand, J. E., Carnegie, N. B., Compton, R. J., Datta, D., Davidson, T., Filippova, A., Gilroy, C., Goode, B. J., Jahani, E., Kashyap, R., Kirchner, A., McKay, S., … McLanahan, S. (2020). Measuring the predictability of life outcomes with a scientific mass collaboration. Proceedings of the National Academy of Sciences. https://doi.org/10.1073/pnas.1915006117

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  79. Nov 2019
  80. www.biorxiv.org www.biorxiv.org
    TAF-ChIP: An ultra-low input approach for genome wide chromatin immunoprecipitation assay
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    Unfolded protein-independent IRE1 activation contributes to multifaceted developmental processes in Arabidopsis
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    Resolving kinesin stepping: one head at a time
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    Detecting Novel Sequence Signals in Targeting Peptides Using Deep Learning
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    Sufficiency analysis of estrogen responsive enhancers using synthetic activators
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    Mechanistic Insights into the Protective Roles of Polyphosphate Against Amyloid Cytotoxicity
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  86. Sep 2019
  87. www.biorxiv.org www.biorxiv.org
    Endogenous RNAi pathway evolutionarily shapes the destiny of the antisense lncRNAs transcriptome
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    let-7 controls the transition to adulthood by releasing select transcriptional regulators from repression by LIN41
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    Ncl1 mediated metabolic rewiring is critical during metabolic stress
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    Kinesin-8B controls basal body function and flagellum formation and is key to malaria parasite transmission
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    XIAP controls RIPK2 signaling by preventing its deposition in speck-like structures
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    Tumor-Intrinsic Response to IFNgamma Shapes the Tumor Microenvironment and Anti-PD-1 Response in NSCLC
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    The WT1-BASP1 complex is required to maintain the differentiated state of taste receptor cells
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    Molecular characterization of Chlamydomonas reinhardtii telomeres and telomerase mutants
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    Molecular characterization of CHAD domains as inorganic polyphosphate binding modules
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    Hierarchical organization of the human cell from a cancer coessentiality network
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    BZLF1 interacts with the chromatin remodeler INO80 promoting escape from latent infections with Epstein-Barr virus
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    The chaperone-client network subordinates cell-cycle entry to growth and stress
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    Maternal Circulating MicroRNAs Control the Placental Response to Alcohol
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    Human CST suppresses origin licensing and promotes AND-1/Ctf4 chromatin association
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    Intra-individual methylomics detects the impact of early-life adversity
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    Human DNA polymerase delta is a pentameric complex with dimeric p12 subunit: Implications in enzyme architecture and PCNA interaction
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    PISD is a mitochondrial disease gene causing skeletal dysplasia, cataracts and white matter changes
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    Expanding the repertoire of glucocorticoid receptor target genes by engineering genomic response elements
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    Worldwide genetic variation of the IGHV and TRBV immune receptor gene families in humans
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    The small and large ribosomal subunits depend on each other for stability and accumulation
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    Main constraints for RNAi induced by expressed long dsRNA in mouse cells
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    MiR-146a wild-type 3\' sequence identity is dispensable for proper innate immune function in vivo
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    Mitochondrial acetyl-CoA reversibly regulates locus-specific histone acetylation and gene expression
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    A junction coverage compatibility score to quantify the reliability of transcript abundance estimates and annotation catalogs
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    Rab1b and ARF5 are novel RNA-binding proteins involved in IRES-driven RNA localization
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    Direct binding of Cdt2 to PCNA is important for targeting the CRL4Cdt2 E3 ligase activity to Cdt1
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    biorxiv.org/content/10.1101/468413v1
  113. www.biorxiv.org www.biorxiv.org
    Mouse REC114 is essential for meiotic DNA double-strand break formation and forms a complex with MEI4
    1
    1. EMBOpress 22 Sep 2019

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    biorxiv.org/content/10.1101/372052v1
  114. www.biorxiv.org www.biorxiv.org
    An integrative machine learning approach for prediction of toxicity-related drug safety
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    1. EMBOpress 22 Sep 2019

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    biorxiv.org/content/10.1101/455667v1
  115. www.biorxiv.org www.biorxiv.org
    Phosphorylation of Arp2 is not essential for Arp2/3 complex activity in fission yeast
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    1. EMBOpress 22 Sep 2019

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    biorxiv.org/content/10.1101/372706v1
  116. www.biorxiv.org www.biorxiv.org
    Specificity for deubiquitination of monoubiquitinated FANCD2 is driven by the N-terminus of USP1
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    1. EMBOpress 22 Sep 2019

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    biorxiv.org/content/10.1101/430124v1
  117. www.biorxiv.org www.biorxiv.org
    Novel organelle anion channels formed by chromogranin B drive normal granule maturation in endocrine cells
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    1. EMBOpress 22 Sep 2019

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    biorxiv.org/content/10.1101/302828v1
  118. www.biorxiv.org www.biorxiv.org
    Cumulative regulatory potential of clustered methyl-arginine protein modifications
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    biorxiv.org/content/10.1101/289041v2
  119. www.biorxiv.org www.biorxiv.org
    Loss of Wt1 in the murine spinal cord alters interneuron composition and locomotion
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    1. EMBOpress 22 Sep 2019

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    biorxiv.org/content/10.1101/226316v1
  120. www.biorxiv.org www.biorxiv.org
    CHRAC/ACF Contribute to the Repressive Ground State of Chromatin
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    1. EMBOpress 22 Sep 2019

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  121. www.biorxiv.org www.biorxiv.org
    Role of Cnot6l in maternal mRNA turnover
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    1. EMBOpress 22 Sep 2019

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    biorxiv.org/content/10.1101/362145v1
  122. www.biorxiv.org www.biorxiv.org
    JIP2 haploinsufficiency contributes to neurodevelopmental abnormalities in human pluripotent stem cell-derived neural progenitors and cortical neurons.
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    biorxiv.org/content/10.1101/196535v1
  123. www.biorxiv.org www.biorxiv.org
    The repressive and alleviating nature of FACT shapes the transcriptional landscape in ES cells
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    1. EMBOpress 22 Sep 2019

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    biorxiv.org/content/10.1101/251611v2
  124. www.biorxiv.org www.biorxiv.org
    The histone chaperone FACT modulates nucleosome structure by tethering its components
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  125. www.biorxiv.org www.biorxiv.org
    Dynamic m6A methylation facilitates mRNA triaging to stress granules
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    biorxiv.org/content/10.1101/357012v1
  126. www.biorxiv.org www.biorxiv.org
    DHX15 regulates CMTR1-dependent gene expression and cell proliferation
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    biorxiv.org/content/10.1101/113209v1
  127. www.biorxiv.org www.biorxiv.org
    Co-existing feedback loops generate tissue-specific circadian rhythms
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    biorxiv.org/content/10.1101/304451v1
  128. www.biorxiv.org www.biorxiv.org
    Multi-region proteome analysis quantifies spatial heterogeneity of prostate tissue biomarkers
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    biorxiv.org/content/10.1101/250167v1
  129. www.biorxiv.org www.biorxiv.org
    The expansion in lymphoid organs of IL-4+ BATF+ T follicular helper cells is linked to IgG4 class switching in vivo
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    biorxiv.org/content/10.1101/284737v1